STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_2011KEGG: bhy:BHWA1_02307 putative phosphoesterase, phosphatidic acid phosphatase-related; PAP2 superfamily; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related. (222 aa)    
Predicted Functional Partners:
Bmur_1549
KEGG: bhy:BHWA1_01913 hypothetical protein.
    
 
 0.760
Bmur_2317
KEGG: bhy:BHWA1_01141 PAP2 family protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related.
  
     0.754
Bmur_1851
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
    
 0.730
Bmur_2012
KEGG: bhy:BHWA1_02308 putative pyridoxine kinase.
       0.495
Bmur_2013
KEGG: bhy:BHWA1_02309 hypothetical protein.
       0.495
Bmur_1553
PFAM: V-type ATPase 116 kDa subunit; KEGG: bhy:BHWA1_01917 putative V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
    
 
 0.465
Bmur_0898
KEGG: bhy:BHWA1_01286 TPR domain-containing protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat.
  
 
 0.461
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.