STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_2051Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (341 aa)    
Predicted Functional Partners:
Bmur_2677
Cyclic nucleotide-binding protein; TIGRFAM: galactokinase; KEGG: bhy:BHWA1_02655 putative galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase domain protein; GHMP kinase.
 0.977
Bmur_0388
Galactokinase; KEGG: bhy:BHWA1_00416 galactokinase; PFAM: GHMP kinase; Galactokinase galactose-binding domain.
 0.976
Bmur_0951
PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: bhy:BHWA1_02412 beta-D-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.916
Bmur_2714
PFAM: ROK family protein; KEGG: bhy:BHWA1_00514 transcriptional regulator/sugar kinase.
  
 
 0.912
Bmur_0348
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 
0.905
Bmur_0811
PFAM: glycoside hydrolase family 4; KEGG: bhy:BHWA1_01142 glycoside hydrolase family 4.
     
  0.900
Bmur_2052
PFAM: Methyltransferase type 12; KEGG: bhy:BHWA1_02254 putative methyltransferase type 12 domain protein.
       0.669
Bmur_1662
KEGG: bhy:BHWA1_01537 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.567
Bmur_2050
KEGG: bhy:BHWA1_02252 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
       0.517
Bmur_0457
TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: bhy:BHWA1_00687 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein.
  
 
 0.484
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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