STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_2162KEGG: bhy:BHWA1_02505 hypothetical protein. (292 aa)    
Predicted Functional Partners:
Bmur_1012
PFAM: Protein of unknown function DUF2262; KEGG: bhy:BHWA1_01976 hypothetical protein.
  
     0.764
Bmur_0194
KEGG: bhy:BHWA1_00735 hypothetical protein.
  
     0.756
Bmur_1626
KEGG: bhy:BHWA1_01954 hypothetical protein.
  
     0.700
Bmur_0838
KEGG: bhy:BHWA1_01204 hypothetical protein.
 
     0.682
Bmur_2780
PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: bhy:BHWA1_00138 hypothetical protein.
 
     0.672
Bmur_2163
KEGG: bhy:BHWA1_02506 hypothetical protein.
       0.613
Bmur_2227
KEGG: bhy:BHWA1_02393 putative effector-binding domain containing protein; PFAM: transcription activator effector binding; SMART: transcription activator effector binding.
  
     0.608
Bmur_0266
KEGG: bhy:BHWA1_02621 hypothetical protein.
 
     0.507
Bmur_0365
PFAM: conserved hypothetical protein; KEGG: bhy:BHWA1_00589 hypothetical protein.
  
     0.439
Bmur_2779
KEGG: bhy:BHWA1_00137 hypothetical protein.
  
     0.438
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.