STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_2201TIGRFAM: dihydroxyacetone kinase, DhaK subunit; KEGG: bhy:BHWA1_02444 dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase. (331 aa)    
Predicted Functional Partners:
Bmur_2200
KEGG: bhy:BHWA1_02443 dihydroxyacetone kinase, L subunit; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase.
  
  0.999
Bmur_2199
Dihydroxyacetone kinase, phosphotransfer subunit; KEGG: bhy:BHWA1_02442 fused predicted dihydroxyacetone-specific PTS enzymes: HPr component/EI component; TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region; Belongs to the PEP-utilizing enzyme family.
 
 
 0.995
Bmur_0051
PFAM: iron-containing alcohol dehydrogenase; KEGG: bhy:BHWA1_00133 glycerol dehydrogenase.
  
 
 0.919
Bmur_1130
PFAM: FAD dependent oxidoreductase; KEGG: bhy:BHWA1_01467 glycerol-3-phosphate dehydrogenase.
    
 0.836
gpsA
KEGG: bhy:BHWA1_00500 glycerol-3-phosphate dehydrogenase (D(P)(+)); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.814
Bmur_1244
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bhy:BHWA1_01959 predicted dehydrogenase.
    
 0.807
Bmur_1246
MIP family channel protein; KEGG: bhy:BHWA1_01961 GlpF, glycerol uptake facilitator-like permease; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.485
Bmur_2202
PFAM: PBS lyase HEAT domain protein repeat- containing protein; KEGG: bhy:BHWA1_02445 hypothetical protein.
       0.434
Bmur_2198
Ankyrin; KEGG: bhy:BHWA1_02441 ankyrin repeat-containing protein; PFAM: Ankyrin; SMART: Ankyrin.
       0.432
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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