STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_2532KEGG: bhy:BHWA1_02585 hypothetical protein. (145 aa)    
Predicted Functional Partners:
Bmur_1533
KEGG: bhy:BHWA1_01702 hypothetical protein.
 
    0.739
Bmur_2531
PFAM: Flagellar protein FlgJ-like; KEGG: bhy:BHWA1_02584 hypothetical protein.
       0.674
Bmur_2533
PFAM: TonB-dependent receptor; KEGG: bhy:BHWA1_02586 TonB-dependent receptor.
       0.526
Bmur_2530
KEGG: bhy:BHWA1_02583 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer.
 
     0.519
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.420
Bmur_0150
PFAM: Apolipoprotein A1/A4/E; RepA / Rep KID repeat- containing protein; KEGG: bhy:BHWA1_00453 hypothetical protein.
  
     0.407
Bmur_1738
KEGG: bhy:BHWA1_01582 hypothetical protein.
 
     0.407
Bmur_1970
KEGG: bhy:BHWA1_02185 integral outer membrane protein TolC, efflux pump component.
 
     0.405
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.