STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_2584PFAM: protein of unknown function DUF534; KEGG: bhy:BHWA1_00396 ABC-type uncharacterized transport system, periplasmic component. (322 aa)    
Predicted Functional Partners:
Bmur_2585
PFAM: inner-membrane translocator; KEGG: bhy:BHWA1_00397 hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
    0.987
Bmur_2586
KEGG: bhy:BHWA1_00398 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.919
Bmur_1729
KEGG: bhy:BHWA1_01666 hypothetical protein.
  
     0.570
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.