STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_2760TIGRFAM: calcium-translocating P-type ATPase, PMCA- type; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bhy:BHWA1_00231 cation transport ATPase; SMART: cation transporting ATPase domain protein. (878 aa)    
Predicted Functional Partners:
Bmur_1271
PFAM: MgtC/SapB transporter; KEGG: bhy:BHWA1_01901 MgtC family protein.
 
 
 0.744
Bmur_2366
PFAM: Cl- channel voltage-gated family protein; KEGG: bhy:BHWA1_01088 putative chloride channel protein.
  
 
 0.575
Bmur_1532
KEGG: bhy:BHWA1_01746 ZntA, cation transport ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase.
 
 
0.574
Bmur_2629
KEGG: bhy:BHWA1_00792 1-acyl-sn-glycerol-3- phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
    
 0.546
Bmur_1552
V-type ATPase, D subunit; KEGG: bhy:BHWA1_01916 V-type ATP synthase subunit D; TIGRFAM: V-type ATPase, D subunit; PFAM: H+transporting two-sector ATPase D subunit.
    
 0.500
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
     
 0.467
Bmur_2077
PFAM: sodium/hydrogen exchanger; KEGG: bhy:BHWA1_01437 Na(+)/H(+) antiporter.
   
 
 0.461
Bmur_1554
PFAM: H+transporting two-sector ATPase C subunit; KEGG: bhy:BHWA1_01918 V-type ATP synthase subunit K.
   
 0.460
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 0.460
Bmur_1813
KEGG: bhy:BHWA1_01365 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein.
   
 0.459
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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