Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gobs_0024 | Gobs_0025 | Gobs_0024 | Gobs_0025 | Hypothetical protein. | Hypothetical protein; KEGG: bpr:GBP346_A1212 cell divisionftsk/spoiiie. | 0.773 |
Gobs_0024 | Gobs_0026 | Gobs_0024 | Gobs_0026 | Hypothetical protein. | PFAM: peptidase S49; KEGG: tel:tlr1610 protease IV-like protein. | 0.403 |
Gobs_0025 | Gobs_0024 | Gobs_0025 | Gobs_0024 | Hypothetical protein; KEGG: bpr:GBP346_A1212 cell divisionftsk/spoiiie. | Hypothetical protein. | 0.773 |
Gobs_0025 | Gobs_0026 | Gobs_0025 | Gobs_0026 | Hypothetical protein; KEGG: bpr:GBP346_A1212 cell divisionftsk/spoiiie. | PFAM: peptidase S49; KEGG: tel:tlr1610 protease IV-like protein. | 0.403 |
Gobs_0026 | Gobs_0024 | Gobs_0026 | Gobs_0024 | PFAM: peptidase S49; KEGG: tel:tlr1610 protease IV-like protein. | Hypothetical protein. | 0.403 |
Gobs_0026 | Gobs_0025 | Gobs_0026 | Gobs_0025 | PFAM: peptidase S49; KEGG: tel:tlr1610 protease IV-like protein. | Hypothetical protein; KEGG: bpr:GBP346_A1212 cell divisionftsk/spoiiie. | 0.403 |
Gobs_0026 | Gobs_0027 | Gobs_0026 | Gobs_0027 | PFAM: peptidase S49; KEGG: tel:tlr1610 protease IV-like protein. | KEGG: sen:SACE_0308 hypothetical protein. | 0.504 |
Gobs_0026 | Gobs_0224 | Gobs_0026 | Gobs_0224 | PFAM: peptidase S49; KEGG: tel:tlr1610 protease IV-like protein. | PFAM: membrane-flanked domain; KEGG: tfu:Tfu_1948 hypothetical protein. | 0.413 |
Gobs_0026 | Gobs_4362 | Gobs_0026 | Gobs_4362 | PFAM: peptidase S49; KEGG: tel:tlr1610 protease IV-like protein. | PFAM: membrane-flanked domain; KEGG: saq:Sare_0804 membrane-flanked domain- containing protein. | 0.413 |
Gobs_0026 | nnrE | Gobs_0026 | Gobs_4463 | PFAM: peptidase S49; KEGG: tel:tlr1610 protease IV-like protein. | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.522 |
Gobs_0027 | Gobs_0026 | Gobs_0027 | Gobs_0026 | KEGG: sen:SACE_0308 hypothetical protein. | PFAM: peptidase S49; KEGG: tel:tlr1610 protease IV-like protein. | 0.504 |
Gobs_0224 | Gobs_0026 | Gobs_0224 | Gobs_0026 | PFAM: membrane-flanked domain; KEGG: tfu:Tfu_1948 hypothetical protein. | PFAM: peptidase S49; KEGG: tel:tlr1610 protease IV-like protein. | 0.413 |
Gobs_4362 | Gobs_0026 | Gobs_4362 | Gobs_0026 | PFAM: membrane-flanked domain; KEGG: saq:Sare_0804 membrane-flanked domain- containing protein. | PFAM: peptidase S49; KEGG: tel:tlr1610 protease IV-like protein. | 0.413 |
nnrE | Gobs_0026 | Gobs_4463 | Gobs_0026 | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | PFAM: peptidase S49; KEGG: tel:tlr1610 protease IV-like protein. | 0.522 |