Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Gobs_0133 | Gobs_0773 | KEGG: sen:SACE_0039 hypothetical protein. | KEGG: sen:SACE_3415 hypothetical protein. | 0.568 |
Gobs_0133 | Gobs_0942 | KEGG: sen:SACE_0039 hypothetical protein. | KEGG: mav:MAV_1207 hypothetical protein. | 0.484 |
Gobs_0133 | Gobs_1368 | KEGG: sen:SACE_0039 hypothetical protein. | KEGG: mpa:MAP2328c hypothetical protein. | 0.653 |
Gobs_0133 | Gobs_1544 | KEGG: sen:SACE_0039 hypothetical protein. | KEGG: similar to KIAA0545 protein. | 0.738 |
Gobs_0133 | Gobs_2804 | KEGG: sen:SACE_0039 hypothetical protein. | KEGG: sen:SACE_3300 hypothetical protein. | 0.624 |
Gobs_0133 | Gobs_3190 | KEGG: sen:SACE_0039 hypothetical protein. | KEGG: rha:RHA1_ro03393 hypothetical protein. | 0.477 |
Gobs_0133 | Gobs_3302 | KEGG: sen:SACE_0039 hypothetical protein. | Putative sigma E regulatory protein, MucB/RseB; KEGG: saq:Sare_1553 hypothetical protein. | 0.545 |
Gobs_0133 | Gobs_4104 | KEGG: sen:SACE_0039 hypothetical protein. | PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: sen:SACE_6217 lipoprotein peptidase LpqM. | 0.482 |
Gobs_0133 | Gobs_4365 | KEGG: sen:SACE_0039 hypothetical protein. | KEGG: nca:Noca_3496 hypothetical protein. | 0.517 |
Gobs_0133 | Gobs_4393 | KEGG: sen:SACE_0039 hypothetical protein. | KEGG: nfa:nfa9540 hypothetical protein. | 0.484 |
Gobs_0773 | Gobs_0133 | KEGG: sen:SACE_3415 hypothetical protein. | KEGG: sen:SACE_0039 hypothetical protein. | 0.568 |
Gobs_0773 | Gobs_0942 | KEGG: sen:SACE_3415 hypothetical protein. | KEGG: mav:MAV_1207 hypothetical protein. | 0.551 |
Gobs_0773 | Gobs_1368 | KEGG: sen:SACE_3415 hypothetical protein. | KEGG: mpa:MAP2328c hypothetical protein. | 0.740 |
Gobs_0773 | Gobs_1544 | KEGG: sen:SACE_3415 hypothetical protein. | KEGG: similar to KIAA0545 protein. | 0.737 |
Gobs_0773 | Gobs_4104 | KEGG: sen:SACE_3415 hypothetical protein. | PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: sen:SACE_6217 lipoprotein peptidase LpqM. | 0.656 |
Gobs_0773 | Gobs_4365 | KEGG: sen:SACE_3415 hypothetical protein. | KEGG: nca:Noca_3496 hypothetical protein. | 0.621 |
Gobs_0773 | Gobs_4393 | KEGG: sen:SACE_3415 hypothetical protein. | KEGG: nfa:nfa9540 hypothetical protein. | 0.769 |
Gobs_0942 | Gobs_0133 | KEGG: mav:MAV_1207 hypothetical protein. | KEGG: sen:SACE_0039 hypothetical protein. | 0.484 |
Gobs_0942 | Gobs_0773 | KEGG: mav:MAV_1207 hypothetical protein. | KEGG: sen:SACE_3415 hypothetical protein. | 0.551 |
Gobs_0942 | Gobs_1368 | KEGG: mav:MAV_1207 hypothetical protein. | KEGG: mpa:MAP2328c hypothetical protein. | 0.765 |
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