Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_0239PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kra:Krad_2945 ABC transporter-related protein. (512 aa)    
Predicted Functional Partners:
Gobs_0240
PFAM: inner-membrane translocator; KEGG: kra:Krad_2944 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.957
Gobs_2641
PFAM: inner-membrane translocator; KEGG: sub:SUB1308 ribose transport system permease protein RbsC.
 
 0.917
Gobs_0238
KEGG: bcv:Bcav_2998 putative sugar ABC transporter.
  
 0.915
Gobs_2642
PFAM: inner-membrane translocator; KEGG: rlg:Rleg_1398 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.914
Gobs_3850
PFAM: inner-membrane translocator; KEGG: kra:Krad_3727 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.907
Gobs_2644
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: cpo:COPRO5265_1464 D-ribose-binding periplasmic protein.
 
 
 0.893
Gobs_2771
PFAM: inner-membrane translocator; KEGG: kra:Krad_4053 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.815
Gobs_3849
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bcv:Bcav_1353 periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.805
Gobs_2772
KEGG: rop:ROP_05200 putative ABC transporter substrate-binding protein.
  
 
 0.609
Gobs_0241
Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: art:Arth_0219 LacI family transcription regulator.
  
  
 0.607
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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