Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_0455Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: fre:Franean1_1577 MarR family transcriptional regulator. (171 aa)    
Predicted Functional Partners:
Gobs_0454
Hypothetical protein; KEGG: GK19423 gene product from transcript GK19423- RA.
  
  
 0.698
Gobs_1263
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: kra:Krad_2941 MarR family transcriptional regulator.
  
     0.568
Gobs_0878
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: kra:Krad_0913 MarR family transcriptional regulator.
  
     0.526
Gobs_0456
TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; histidinol-phosphate phosphatase family protein; HAD- superfamily hydrolase, subfamily IA, variant 3; HAD- superfamily hydrolase, subfamily IA, variant 1; PFAM: glycosyl transferase family 2; Haloacid dehalogenase domain protein hydrolase; KEGG: rxy:Rxyl_0716 HAD family hydrolase.
     
 0.497
Gobs_0460
PFAM: sugar isomerase (SIS); KEGG: sco:SCO6186 phosphoheptose isomerase.
     
 0.488
Gobs_0457
PFAM: glycosyl transferase family 9; KEGG: sen:SACE_5573 glycosyl transferase family protein.
       0.480
Gobs_0458
Transferase; KEGG: sco:SCO6184 transferase.
       0.480
Gobs_0461
rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
       0.480
Gobs_0459
PFAM: glycosyl transferase group 1; KEGG: mav:MAV_4082 transferase.
       0.472
Gobs_0453
Lactate 2-monooxygenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: rxy:Rxyl_1052 lactate 2-monooxygenase.
       0.471
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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