Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Gobs_0693Hypothetical protein; KEGG: GK21216 gene product from transcript GK21216- RA. (439 aa)    
Predicted Functional Partners:
Gobs_0692
Hypothetical protein.
       0.781
Gobs_0689
KEGG: nca:Noca_1576 type IV secretory pathway VirD4 components-like.
       0.648
Gobs_0690
KEGG: aau:AAur_pTC10039 hypothetical protein.
       0.648
Gobs_0691
Hypothetical protein; KEGG: nca:Noca_4800 DNA primase catalytic core.
       0.648
Gobs_0682
KEGG: nca:Noca_4716 hypothetical protein.
       0.503
Gobs_0683
KEGG: nca:Noca_2238 hypothetical protein.
       0.503
Gobs_0684
KEGG: nca:Noca_4714 hypothetical protein.
       0.503
Gobs_0685
KEGG: nca:Noca_1570 hypothetical protein.
       0.503
Gobs_0686
KEGG: nca:Noca_1571 hypothetical protein.
       0.503
Gobs_0687
KEGG: nca:Noca_2243 ATP-binding protein.
       0.503
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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