Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_0798Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (91 aa)    
Predicted Functional Partners:
vapC
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
  
 0.967
Gobs_0799
PFAM: Abortive infection protein; KEGG: art:Arth_3477 abortive infection protein.
       0.648
Gobs_0800
PFAM: Abortive infection protein; KEGG: art:Arth_3477 abortive infection protein.
       0.575
Gobs_0801
KEGG: rhi:NGR_b08140 hypothetical protein.
       0.575
Gobs_2569
Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein; KEGG: mtc:MT1992 hypothetical protein.
  
   
 0.486
Gobs_0796
PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase; AAA ATPase; KEGG: kra:Krad_3772 type III restriction protein res subunit.
       0.447
Gobs_0802
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: sen:SACE_4748 protein kinase/LuxR family transcriptional regulator.
       0.416
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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