Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Gobs_0933SMART: von Willebrand factor type A; KEGG: fre:Franean1_0822 von Willebrand factor type A. (661 aa)    
Predicted Functional Partners:
Gobs_0934
KEGG: fre:Franean1_0823 putative magnesium chelatase.
 
    0.969
Gobs_0935
TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: nca:Noca_0979 threonine dehydratase.
       0.629
Gobs_2665
KEGG: ace:Acel_1171 hypothetical protein.
 
     0.552
Gobs_0932
PFAM: GCN5-related N-acetyltransferase; KEGG: ace:Acel_0804 GCN5-related N- acetyltransferase.
       0.528
Gobs_0936
KEGG: rer:RER_07210 ABC transporter ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.428
Gobs_0937
PFAM: ABC-2 type transporter; KEGG: nca:Noca_1483 ABC-2 type transporter.
       0.428
Gobs_2663
PFAM: Phosphoglycerate mutase; KEGG: kra:Krad_1833 phosphoglycerate mutase.
 
     0.420
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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