Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Gobs_0937PFAM: ABC-2 type transporter; KEGG: nca:Noca_1483 ABC-2 type transporter. (269 aa)    
Predicted Functional Partners:
Gobs_0936
KEGG: rer:RER_07210 ABC transporter ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.963
Gobs_2293
KEGG: sco:SCO3824 ABC-transporter ATP-binding component; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.842
Gobs_0938
Peptidyl-dipeptidase Dcp; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: cmi:CMM_1468 putative peptidyl-dipeptidase.
       0.679
Gobs_0260
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sen:SACE_0207 daunorubicin resistance ABC transporter ATPase subunit.
 
  
 0.620
Gobs_1027
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kra:Krad_0672 ABC transporter-related protein.
 
  
 0.606
Gobs_0935
TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: nca:Noca_0979 threonine dehydratase.
       0.600
Gobs_4397
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: saq:Sare_4004 ABC transporter related.
 
  
 0.553
Gobs_2922
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mkm:Mkms_2252 ABC transporter related.
 
  
 0.517
Gobs_4396
PFAM: ABC-2 type transporter; KEGG: saq:Sare_4005 ABC-2 type transporter.
  
  
  0.500
Gobs_1028
PFAM: ABC-2 type transporter; KEGG: kra:Krad_0671 ABC-2 type transporter.
  
  
  0.486
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.