Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Gobs_0973PFAM: Lytic transglycosylase catalytic; NLP/P60 protein; Transglycosylase domain protein; KEGG: nca:Noca_0754 lytic transglycosylase, catalytic. (318 aa)    
Predicted Functional Partners:
Gobs_0971
PFAM: flagellar hook capping protein; KEGG: nca:Noca_0752 flagellar hook capping protein.
 
    0.903
Gobs_0972
PFAM: flagellar hook-length control protein; KEGG: kra:Krad_1656 flagellar hook-length control protein.
 
    0.893
Gobs_0976
PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: ace:Acel_0843 flagellar biosynthesis/type III secretory pathway protein-like.
 
  
 0.887
Gobs_0967
PFAM: OmpA/MotB domain protein; KEGG: ace:Acel_0852 OmpA/MotB domain-containing protein.
 
  
 0.873
Gobs_0974
Hypothetical protein; KEGG: dds:Ddes_0097 ErfK/YbiS/YcfS/YnhG family protein.
  
    0.849
Gobs_0116
KEGG: mva:Mvan_1931 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; GAF domain protein; Sulfate transporter/antisigma-factor antagonist STAS; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAC repeat-containing protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing prot [...]
     
 0.844
Gobs_3213
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: sen:SACE_5742 putative glutamate synthase(NADPH) large subunit.
     
 0.843
Gobs_3518
PFAM: Peptidase M23; KEGG: sen:SACE_5687 membrane proteins related to metalloendopeptidases.
 
  
 0.831
Gobs_0975
KEGG: ace:Acel_0844 flagellar protein export ATPase FliI; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase.
  
  
 0.828
Gobs_0966
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
   0.819
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.