Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_1027PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kra:Krad_0672 ABC transporter-related protein. (317 aa)    
Predicted Functional Partners:
Gobs_1028
PFAM: ABC-2 type transporter; KEGG: kra:Krad_0671 ABC-2 type transporter.
 
  
 0.949
Gobs_4396
PFAM: ABC-2 type transporter; KEGG: saq:Sare_4005 ABC-2 type transporter.
 
  
 0.815
Gobs_1029
Integral membrane sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: cms:CMS_0993 putative two-component system sensor kinase.
       0.787
Gobs_1030
Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sgr:SGR_204 putative two-component system response regulator.
       0.787
Gobs_1031
PFAM: GCN5-related N-acetyltransferase; KEGG: jan:Jann_1855 acetyltransferase.
       0.781
Gobs_4638
ABC-type antimicrobial peptide transport system ATPase component-like protein; KEGG: tro:trd_0224 putative ABC superfamily (atp&memb) transport protein.
  
     0.645
Gobs_2294
PFAM: ABC-2 type transporter; KEGG: bcv:Bcav_1236 ABC-2 type transporter.
 
  
 0.624
Gobs_0937
PFAM: ABC-2 type transporter; KEGG: nca:Noca_1483 ABC-2 type transporter.
 
  
 0.606
Gobs_2921
KEGG: sen:SACE_2702 putative exporter of polyketide antibiotics-like protein.
  
 
 0.495
Gobs_1025
KEGG: met:M446_2290 hypothetical protein.
       0.491
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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