Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_1335PFAM: phosphoribosyltransferase; KEGG: tfu:Tfu_1746 hypothetical protein. (446 aa)    
Predicted Functional Partners:
Gobs_3856
PFAM: Erythromycin esterase; KEGG: art:Arth_2047 erythromycin esterase.
     0.943
Gobs_1771
KEGG: fre:Franean1_5795 hypothetical protein.
  
  
 0.682
Gobs_2355
PFAM: peptidase M50; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: sen:SACE_2437 peptidase M50; Belongs to the peptidase M50B family.
 
  
 0.637
Gobs_5011
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.608
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
    0.583
Gobs_3694
KEGG: aau:AAur_2059 hypothetical protein.
   
    0.564
Gobs_3386
PFAM: heat shock protein Hsp20; KEGG: ace:Acel_1474 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
 
  
 0.542
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
    0.541
Gobs_2164
PFAM: protein of unknown function DUF72; KEGG: art:Arth_3443 hypothetical protein.
 
     0.515
Gobs_3099
KEGG: fre:Franean1_1972 hypothetical protein.
 
  
 0.515
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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