Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Gobs_1786PFAM: aminotransferase class I and II; KEGG: bcv:Bcav_0562 aminotransferase class I and II. (386 aa)    
Predicted Functional Partners:
Gobs_4210
Cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sgr:SGR_2579 cystathionine gamma-synthase.
 
 
 0.953
Gobs_4904
O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: rop:ROP_62960 O-acetylhomoserine (thiol)- lyase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein.
   
 0.946
Gobs_4046
PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: sen:SACE_6136 cystathionine gamma-lyase.
 
 
 0.942
Gobs_2671
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.935
Gobs_4209
KEGG: rha:RHA1_ro05843 cystathionine beta-synthase; TIGRFAM: cystathionine beta-synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; CBS domain containing protein; SMART: CBS domain containing protein.
    
 0.923
Gobs_3061
PFAM: homocysteine S-methyltransferase; KEGG: sen:SACE_3890 homocysteine methyltransferase.
  
  
 0.920
Gobs_4527
PFAM: aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sma:SAV_4907 aspartate aminotransferase.
    
0.911
Gobs_1776
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: aau:AAur_0822 putative thiosulfate sulfurtransferase.
    
 0.909
Gobs_4642
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: rha:RHA1_ro04856 thiosulfate sulfurtransferase.
     
 0.901
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
  0.900
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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