Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_1963PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; WD40 domain protein beta Propeller; KEGG: bcv:Bcav_0810 peptidase S9 prolyl oligopeptidase active site domain protein. (669 aa)    
Predicted Functional Partners:
Gobs_1962
PFAM: Integral membrane protein TerC; KEGG: rsa:RSal33209_2291 tellurium resistance protein.
       0.682
Gobs_1964
PFAM: Acetamidase/Formamidase; KEGG: mjl:Mjls_2686 acetamidase/formamidase.
       0.615
Gobs_1965
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: msm:MSMEG_4382 dehydrogenase/reductase SDR family protein member 10.
       0.575
Gobs_1966
Hypothetical protein.
       0.519
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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