Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_1999PFAM: transposase IS4 family protein; KEGG: sco:SCO7812 insertion element transposase. (324 aa)    
Predicted Functional Partners:
Gobs_3472
PFAM: Tetratricopeptide TPR_4; TPR repeat- containing protein; SMART: Tetratricopeptide repeat; KEGG: ade:Adeh_3415 TPR repeat-containing protein.
  
     0.767
Gobs_2974
PFAM: transposase IS4 family protein; KEGG: sco:SCO3470 transposase.
  
     0.763
Gobs_3548
PFAM: transposase IS4 family protein; KEGG: fra:Francci3_2546 transposase.
  
     0.762
Gobs_2917
PFAM: transposase IS4 family protein; KEGG: sco:SCO3470 transposase.
  
     0.758
Gobs_3449
PFAM: transposase IS4 family protein; KEGG: sco:SCO3470 transposase.
  
     0.758
Gobs_3531
PFAM: transposase IS4 family protein; KEGG: sco:SCO3470 transposase.
  
     0.758
Gobs_0696
PFAM: transposase IS4 family protein; KEGG: sco:SCO3470 transposase.
  
     0.757
Gobs_1851
KEGG: Hypothetical protein CBG02561.
  
     0.755
Gobs_0580
KEGG: met:M446_2019 hypothetical protein.
  
     0.750
Gobs_1992
PFAM: transposase IS4 family protein; KEGG: sen:SACE_4676 IS402-like transposase.
  
     0.745
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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