Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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Score
Gobs_2113Hypothetical protein; KEGG: sen:SACE_4196 anti-sigma factor. (165 aa)    
Predicted Functional Partners:
Gobs_2112
TIGRFAM: RNA polymerase sigma-70 factor, sigma- B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; Sigma-70 region 4 type 2; sigma- 70 region 4 domain protein; KEGG: fra:Francci3_3755 sigma 28 subunit.
 
 
 0.953
Gobs_0116
KEGG: mva:Mvan_1931 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; GAF domain protein; Sulfate transporter/antisigma-factor antagonist STAS; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAC repeat-containing protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing prot [...]
 
 
 0.930
Gobs_0277
Multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; CHASE3 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; response regulator receiver; histidine kinase HAMP region domain protein; KEGG: mag:amb3735 signal transduction histidine kinase.
  
  
 0.878
Gobs_2109
KEGG: saq:Sare_3247 hypothetical protein.
  
     0.757
Gobs_2608
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ace:Acel_1975 anti-sigma-factor antagonist.
 
 
 0.751
Gobs_2114
Anti-sigma-factor antagonist; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; Sulfate transporter/antisigma-factor antagonist STAS; SMART: protein phosphatase 2C domain protein; KEGG: nca:Noca_1923 stage II sporulation E family protein.
 
   0.721
Gobs_4262
KEGG: sma:SAV_3104 hypothetical protein.
  
     0.694
Gobs_2116
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mva:Mvan_4702 anti-sigma-factor antagonist.
 
 
 0.693
Gobs_3834
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bcv:Bcav_0628 anti-sigma-factor antagonist.
 
 
 0.691
Gobs_3970
KEGG: mgi:Mflv_4044 hypothetical protein.
  
     0.691
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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