Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_21844-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding; KEGG: rso:RSc2242 4-hydroxybenzoate 3-monooxygenase. (389 aa)    
Predicted Functional Partners:
Gobs_2186
TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: rer:RER_52860 protocatechuate 3,4-dioxygenase beta subunit.
 
 
 0.988
Gobs_2187
KEGG: sen:SACE_3513 protocatechuate 3,4-dioxygenase alpha chain; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase.
 
 
 0.988
Gobs_2188
TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase; KEGG: rha:RHA1_ro01337 3-carboxy-cis,cis-muconate cycloisomerase.
 
   
 0.863
Gobs_2190
TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; KEGG: xcv:XCV0385 4-carboxymuconolactone decarboxylase.
 
   
 0.852
Gobs_2836
PFAM: amidohydrolase 2; KEGG: rop:ROP_51830 putative hydrolase.
 
  
 0.665
Gobs_2826
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: cef:CE0634 putative vanillate O-demethylase oxygenase subunit A.
  
  
 0.659
Gobs_2185
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: mva:Mvan_0559 regulatory proteins, IclR.
     
 0.627
Gobs_1294
TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: art:Arth_1933 catechol 1,2-dioxygenase.
 
   
 0.625
Gobs_2189
TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: msm:MSMEG_1897 3-oxoadipate enol-lactonase.
 
   0.572
aroE
Shikimate dehydrogenase substrate binding domain protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
  
 
 
 0.441
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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