Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_2773PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sco:SCO6988 oxidoreductase. (391 aa)    
Predicted Functional Partners:
Gobs_2764
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sen:SACE_2907 sugar phosphate isomerase/epimerase.
 
  
 0.753
Gobs_4291
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sus:Acid_6205 oxidoreductase domain- containing protein.
  
     0.672
Gobs_2745
PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rop:ROP_10690 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
  
 0.657
Gobs_2772
KEGG: rop:ROP_05200 putative ABC transporter substrate-binding protein.
 
  
 0.625
Gobs_3847
PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; KEGG: bcv:Bcav_1355 xylose isomerase domain protein TIM barrel.
 
  
 0.616
Gobs_2746
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rer:RER_20170 2-keto-myo-inositol dehydratase IolE.
 
  
 0.605
Gobs_2744
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: rop:ROP_10680 5-deoxy-glucuronate isomerase.
 
  
 0.600
Gobs_2770
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6259 sugar ABC transporter ATP-binding protein.
 
  
 0.530
Gobs_4127
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: kra:Krad_3270 oxidoreductase domain- containing protein.
  
     0.529
Gobs_2771
PFAM: inner-membrane translocator; KEGG: kra:Krad_4053 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.524
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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