Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Gobs_3384PFAM: class II aldolase/adducin family protein; KEGG: tko:TK2132 L-fuculose phosphate aldolase. (213 aa)    
Predicted Functional Partners:
Gobs_3385
KEGG: sen:SACE_3608 methylthioribose-1-phosphate isomerase; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; Belongs to the eIF-2B alpha/beta/delta subunits family.
 
  
 0.946
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.691
Gobs_4852
TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: rop:ROP_67680 putative fructose-specific phosphotransferase system enzyme II.
  
  
 0.685
Gobs_0115
KEGG: fal:FRAAL1466 hypothetical protein.
   
    0.555
Gobs_1137
Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: sgr:SGR_1172 putative lyase; Belongs to the HpcH/HpaI aldolase family.
   
    0.555
Gobs_3647
KEGG: vei:Veis_3054 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
   
    0.555
Gobs_4340
PFAM: HpcH/HpaI aldolase; KEGG: rha:RHA1_ro00775 citrate lyase; Belongs to the HpcH/HpaI aldolase family.
   
    0.555
Gobs_3386
PFAM: heat shock protein Hsp20; KEGG: ace:Acel_1474 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
       0.530
Gobs_2671
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.511
Gobs_0242
PFAM: Carbohydrate kinase, FGGY-like; KEGG: cpy:Cphy_1145 carbohydrate kinase FGGY.
 
  
 0.495
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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