Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_3591PFAM: glycosyl transferase group 1; KEGG: rop:ROP_47540 putative glycosyltransferase. (416 aa)    
Predicted Functional Partners:
Gobs_3592
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sco:SCO2317 methyltransferase.
 
   
 0.896
Gobs_3593
KEGG: tfu:Tfu_0571 hypothetical protein.
 
     0.894
Gobs_3597
KEGG: sgr:SGR_5196 hypothetical protein.
 
  
 0.789
Gobs_3595
PFAM: glycosyl transferase family 2; KEGG: sco:SCO6190 transferase.
 
    0.656
Gobs_3594
PFAM: glycosyl transferase family 2; KEGG: rxy:Rxyl_0477 glycosyl transferase family protein.
 
    0.615
Gobs_3590
PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: tfu:Tfu_0763 hypothetical protein.
 
     0.609
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.496
Gobs_1207
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gbm:Gbem_1827 alpha amylase catalytic region; Belongs to the glycosyl hydrolase 13 family.
   
 0.492
Gobs_1952
KEGG: nfa:nfa18050 putative glycosyl hydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain.
   
 0.492
Gobs_0373
KEGG: kra:Krad_1048 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.477
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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