Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Gobs_3597KEGG: sgr:SGR_5196 hypothetical protein. (235 aa)    
Predicted Functional Partners:
Gobs_3592
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sco:SCO2317 methyltransferase.
 
   
 0.869
Gobs_3593
KEGG: tfu:Tfu_0571 hypothetical protein.
 
   
 0.811
Gobs_3591
PFAM: glycosyl transferase group 1; KEGG: rop:ROP_47540 putative glycosyltransferase.
 
  
 0.789
Gobs_3598
PFAM: YibE/F family protein; KEGG: aau:AAur_1485 YibE/F-like family protein.
       0.789
Gobs_3596
Transcriptional regulator, TraR/DksA family; KEGG: fal:FRAAL6492 hypothetical protein.
       0.787
Gobs_3599
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mjl:Mjls_3336 anti-sigma-factor antagonist.
       0.625
Gobs_0824
KEGG: nca:Noca_1148 hypothetical protein.
  
     0.508
Gobs_1870
KEGG: stp:Strop_1479 hypothetical protein.
  
     0.406
Gobs_1605
PFAM: VWA containing CoxE family protein; KEGG: fal:FRAAL1933 hypothetical protein.
  
     0.402
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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