Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_3602PFAM: protein of unknown function DUF156; KEGG: rop:ROP_33320 hypothetical protein. (100 aa)    
Predicted Functional Partners:
Gobs_3605
TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: tfu:Tfu_2848 ATPase, E1-E2 type:copper- translocating P-type ATPase:heavy metal translocating P- type ATPase.
 
  
 0.780
Gobs_3603
PFAM: Heavy metal transport/detoxification protein; KEGG: rop:ROP_33290 putative copper chaperone CopZ.
  
  
 0.754
Gobs_3604
KEGG: nfa:nfa1610 hypothetical protein.
     
 0.676
Gobs_2885
TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mva:Mvan_3767 alcohol dehydrogenase.
  
  
 0.579
Gobs_2902
TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rha:RHA1_ro02587 mycothiol-dependent formaldehyde dehydrogenase.
  
  
 0.579
Gobs_4761
TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mva:Mvan_3767 alcohol dehydrogenase.
  
  
 0.579
Gobs_4948
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rer:RER_54160 zinc-containing alcohol dehydrogenase.
  
  
 0.579
Gobs_3601
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: sen:SACE_3658 MerR family transcriptional regulator.
     
 0.575
Gobs_3606
KEGG: stp:Strop_1182 hypothetical protein.
       0.426
Gobs_3600
PFAM: heat shock protein Hsp20; KEGG: ace:Acel_0609 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
       0.424
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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