Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_4168KEGG: stp:Strop_3689 hypothetical protein. (260 aa)    
Predicted Functional Partners:
Gobs_4167
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3688 ABC transporter related.
 
     0.869
Gobs_4169
PFAM: Ankyrin; SMART: Ankyrin; KEGG: aas:Aasi_0703 hypothetical protein.
   
 
 0.571
Gobs_0779
KEGG: saq:Sare_0297 hypothetical protein.
 
 
 0.517
Gobs_4166
PFAM: UspA domain protein; KEGG: rha:RHA1_ro00974 hypothetical protein.
       0.513
Gobs_2921
KEGG: sen:SACE_2702 putative exporter of polyketide antibiotics-like protein.
  
 
 0.495
Gobs_4396
PFAM: ABC-2 type transporter; KEGG: saq:Sare_4005 ABC-2 type transporter.
 
  
 0.483
Gobs_1028
PFAM: ABC-2 type transporter; KEGG: kra:Krad_0671 ABC-2 type transporter.
 
  
 0.462
Gobs_4165
KEGG: rha:RHA1_ro05084 adenylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase.
   
   0.450
Gobs_1442
Hypothetical protein; KEGG: ade:Adeh_0244 LigA.
  
    0.427
Gobs_4156
KEGG: rer:RER_39250 hypothetical protein.
  
     0.427
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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