node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gobs_0651 | Gobs_3563 | Gobs_0651 | Gobs_3563 | Transcriptional regulator, CarD family; PFAM: transcription factor CarD; KEGG: fal:FRAAL6525 putative CarD-like transcriptional regulator. | RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.860 |
Gobs_0651 | rbpA-2 | Gobs_0651 | Gobs_2706 | Transcriptional regulator, CarD family; PFAM: transcription factor CarD; KEGG: fal:FRAAL6525 putative CarD-like transcriptional regulator. | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.975 |
Gobs_0651 | rpoA | Gobs_0651 | Gobs_4479 | Transcriptional regulator, CarD family; PFAM: transcription factor CarD; KEGG: fal:FRAAL6525 putative CarD-like transcriptional regulator. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.964 |
Gobs_0651 | rpoB | Gobs_0651 | Gobs_4519 | Transcriptional regulator, CarD family; PFAM: transcription factor CarD; KEGG: fal:FRAAL6525 putative CarD-like transcriptional regulator. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.963 |
Gobs_0651 | rpoC | Gobs_0651 | Gobs_4518 | Transcriptional regulator, CarD family; PFAM: transcription factor CarD; KEGG: fal:FRAAL6525 putative CarD-like transcriptional regulator. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.975 |
Gobs_0651 | rpoZ | Gobs_0651 | Gobs_3126 | Transcriptional regulator, CarD family; PFAM: transcription factor CarD; KEGG: fal:FRAAL6525 putative CarD-like transcriptional regulator. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.957 |
Gobs_0651 | sigA | Gobs_0651 | Gobs_1864 | Transcriptional regulator, CarD family; PFAM: transcription factor CarD; KEGG: fal:FRAAL6525 putative CarD-like transcriptional regulator. | RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.860 |
Gobs_0651 | whiB-3 | Gobs_0651 | Gobs_4230 | Transcriptional regulator, CarD family; PFAM: transcription factor CarD; KEGG: fal:FRAAL6525 putative CarD-like transcriptional regulator. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.824 |
Gobs_3012 | rpoB | Gobs_3012 | Gobs_4519 | KEGG: nfa:nfa19960 putative cytotoxin/hemolysin; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.577 |
Gobs_3012 | rpoC | Gobs_3012 | Gobs_4518 | KEGG: nfa:nfa19960 putative cytotoxin/hemolysin; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.684 |
Gobs_3012 | whiB-3 | Gobs_3012 | Gobs_4230 | KEGG: nfa:nfa19960 putative cytotoxin/hemolysin; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.669 |
Gobs_3563 | Gobs_0651 | Gobs_3563 | Gobs_0651 | RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator, CarD family; PFAM: transcription factor CarD; KEGG: fal:FRAAL6525 putative CarD-like transcriptional regulator. | 0.860 |
Gobs_3563 | rbpA-2 | Gobs_3563 | Gobs_2706 | RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.946 |
Gobs_3563 | rpoA | Gobs_3563 | Gobs_4479 | RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.981 |
Gobs_3563 | rpoB | Gobs_3563 | Gobs_4519 | RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.986 |
Gobs_3563 | rpoC | Gobs_3563 | Gobs_4518 | RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.975 |
Gobs_3563 | rpoZ | Gobs_3563 | Gobs_3126 | RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.945 |
Gobs_3563 | whiB-3 | Gobs_3563 | Gobs_4230 | RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.822 |
Gobs_4189 | whiB-3 | Gobs_4189 | Gobs_4230 | TIGRFAM: anti-sigma factor; KEGG: sen:SACE_6429 anti-sigma factor. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.616 |
rbpA-2 | Gobs_0651 | Gobs_2706 | Gobs_0651 | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | Transcriptional regulator, CarD family; PFAM: transcription factor CarD; KEGG: fal:FRAAL6525 putative CarD-like transcriptional regulator. | 0.975 |