Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_4396PFAM: ABC-2 type transporter; KEGG: saq:Sare_4005 ABC-2 type transporter. (272 aa)    
Predicted Functional Partners:
Gobs_4397
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: saq:Sare_4004 ABC transporter related.
 
  
 0.959
Gobs_1027
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kra:Krad_0672 ABC transporter-related protein.
 
  
 0.815
Gobs_4395
KEGG: sen:SACE_6573 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase.
       0.658
Gobs_3234
PFAM: nitroreductase; KEGG: saq:Sare_0515 nitroreductase.
 
  
 0.531
Gobs_0626
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bcv:Bcav_2671 substrate-binding region of ABC- type glycine betaine transport system.
 
  
  0.518
Gobs_2294
PFAM: ABC-2 type transporter; KEGG: bcv:Bcav_1236 ABC-2 type transporter.
  
  
  0.517
Gobs_4400
PFAM: inner-membrane translocator; KEGG: sgr:SGR_2651 putative sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
    0.516
Gobs_2293
KEGG: sco:SCO3824 ABC-transporter ATP-binding component; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.503
Gobs_0937
PFAM: ABC-2 type transporter; KEGG: nca:Noca_1483 ABC-2 type transporter.
  
  
  0.500
Gobs_4839
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sgr:SGR_3866 putative ABC transporter ATP- binding protein.
 
  
 0.489
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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