Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_4402PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sgr:SGR_2653 putative sugar ABC transporter ATP-binding protein. (524 aa)    
Predicted Functional Partners:
Gobs_4400
PFAM: inner-membrane translocator; KEGG: sgr:SGR_2651 putative sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
Gobs_4401
PFAM: inner-membrane translocator; KEGG: sgr:SGR_2652 putative sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
Gobs_4403
PFAM: basic membrane lipoprotein; KEGG: nca:Noca_3541 basic membrane lipoprotein.
 
 
 0.996
Gobs_4399
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
 0.875
Gobs_4398
KEGG: nca:Noca_3535 thymidine phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like.
     
 0.845
Gobs_2641
PFAM: inner-membrane translocator; KEGG: sub:SUB1308 ribose transport system permease protein RbsC.
 
     0.611
Gobs_2642
PFAM: inner-membrane translocator; KEGG: rlg:Rleg_1398 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.591
Gobs_4395
KEGG: sen:SACE_6573 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase.
       0.532
Gobs_3850
PFAM: inner-membrane translocator; KEGG: kra:Krad_3727 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
     0.489
Gobs_0064
PFAM: CinA domain protein; molybdopterin binding domain; KEGG: mjl:Mjls_2737 competence damage-inducible protein A; Belongs to the CinA family.
       0.478
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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