Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_4656PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: rpb:RPB_2699 siderophore-interacting protein. (261 aa)    
Predicted Functional Partners:
trpE
Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]
  
  
 0.605
Gobs_5028
PFAM: periplasmic binding protein; KEGG: saq:Sare_2404 periplasmic binding protein.
 
  
 0.578
Gobs_1278
KEGG: fre:Franean1_7244 hypothetical protein.
  
    0.547
Gobs_5027
PFAM: transport system permease protein; KEGG: atc:AGR_C_4489 ferrichrome ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.537
Gobs_4657
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: stp:Strop_3686 response regulator receiver.
       0.530
Gobs_4658
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: rop:ROP_48340 two-component histidine kinase PhoR.
       0.528
Gobs_2871
TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; aminotransferase class IV; KEGG: afw:Anae109_1629 para-aminobenzoate synthase, subunit I.
  
  
 0.515
Gobs_5026
PFAM: transport system permease protein; KEGG: ach:Achl_3785 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.507
Gobs_4659
PFAM: thioesterase superfamily protein; KEGG: stp:Strop_2628 thioesterase superfamily protein.
  
    0.501
Gobs_4660
PFAM: inositol monophosphatase; KEGG: nca:Noca_0913 inositol monophosphatase.
       0.465
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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