Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_4697PFAM: LmbE family protein; KEGG: ace:Acel_0634 LmbE family protein. (233 aa)    
Predicted Functional Partners:
Gobs_4698
KEGG: ace:Acel_0526 hypothetical protein.
       0.773
Gobs_4702
PFAM: protein of unknown function DUF201; KEGG: ace:Acel_0637 hypothetical protein.
 
     0.757
Gobs_4703
Hypothetical protein; KEGG: Gm3773; predicted gene 3773.
 
     0.706
Gobs_4700
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ace:Acel_0639 HAD family hydrolase.
 
    0.664
Gobs_4704
PFAM: glycosyl transferase family 2; KEGG: ace:Acel_0635 glycosyl transferase family protein.
 
     0.652
Gobs_4699
Hypothetical protein; KEGG: rrs:RoseRS_4621 alpha beta-propellor repeat- containing integrin.
       0.536
Gobs_4701
KEGG: ace:Acel_0638 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
     0.499
Gobs_0957
Hypothetical protein; KEGG: GH10507 gene product from transcript GH10507- RA.
  
     0.494
Gobs_4369
KEGG: cms:CMS_2737 hypothetical protein.
  
     0.478
Gobs_4356
PFAM: lipolytic protein G-D-S-L family; KEGG: cmi:CMM_0725 putative esterase.
  
     0.418
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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