Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Gobs_4778KEGG: sen:SACE_7174 hypothetical protein. (205 aa)    
Predicted Functional Partners:
Gobs_1468
KEGG: sen:SACE_1520 hypothetical protein.
  
     0.774
Gobs_0629
KEGG: mva:Mvan_5366 hypothetical protein.
  
     0.772
Gobs_4255
KEGG: rha:RHA1_ro06355 hypothetical protein.
  
     0.772
Gobs_4393
KEGG: nfa:nfa9540 hypothetical protein.
  
     0.770
Gobs_4624
KEGG: sen:SACE_7115 aerial mycelium formation protein.
  
     0.754
Gobs_0942
KEGG: mav:MAV_1207 hypothetical protein.
  
     0.753
Gobs_0986
Hypothetical protein; KEGG: gsu:GSU3023 glycosyl transferase, group 1/2 family protein.
  
    0.752
Gobs_4115
KEGG: sen:SACE_6241 M protein.
  
    0.742
Gobs_4594
KEGG: cur:cur_0218 hypothetical protein.
  
     0.742
Gobs_4098
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: fre:Franean1_0737 FHA domain-containing protein.
 
     0.741
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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