Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_4822PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: stp:Strop_4266 methyltransferase type 11. (233 aa)    
Predicted Functional Partners:
Gobs_2384
TIGRFAM: ubiquinone biosynthesis O- methyltransferase; PFAM: Methyltransferase type 11; methyltransferase small; Methyltransferase type 12; KEGG: rha:RHA1_ro05098 3-demethylubiquinone-9 3-O- methyltransferase.
  
  
 
0.924
Gobs_4823
KEGG: mch:Mchl_0675 putative DNA-binding protein.
       0.781
Gobs_4821
PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: stp:Strop_4264 chalcone/stilbene synthase domain-containing protein.
 
  
 0.737
Gobs_4824
KEGG: kra:Krad_0979 hypothetical protein.
       0.555
rbsK
PfkB domain protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
       0.496
Gobs_4228
PFAM: ABC-1 domain protein; KEGG: stp:Strop_3736 hypothetical protein.
  
 
 0.465
Gobs_2137
KEGG: sen:SACE_4995 hypothetical protein.
   
   0.444
Gobs_3295
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: fal:FRAAL2165 CDP-diacylglycerol-inositol 3- phosphatidyltransferase.
  
    0.439
Gobs_4820
Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: ace:Acel_0518 two component LuxR family transcriptional regulator.
       0.425
Gobs_3754
PFAM: ABC-1 domain protein; KEGG: saq:Sare_4117 hypothetical protein.
  
 
 0.424
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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