Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Gobs_4886PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: art:Arth_0913 alpha amylase, catalytic region. (571 aa)    
Predicted Functional Partners:
Gobs_4101
KEGG: ace:Acel_0678 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
  
 
0.925
Gobs_3093
4-alpha-glucanotransferase; KEGG: mbt:JTY_1798 putative 4-alpha- glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77.
  
 
 0.924
Gobs_1532
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rha:RHA1_ro01389 alpha-glucosidase.
  
  
 
0.919
Gobs_1794
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: stp:Strop_0801 alpha amylase, catalytic region.
  
  
 
0.919
Gobs_2302
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rxy:Rxyl_3169 alpha amylase, catalytic region.
  
  
 
0.914
Gobs_2633
Beta-amylase; PFAM: glycoside hydrolase family 14; KEGG: cbi:CLJ_B1243 beta-amylase.
    
 0.906
Gobs_4102
KEGG: fra:Francci3_3680 putative pep2 protein.
 
 
 0.688
Gobs_4885
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_0239 short-chain dehydrogenase/reductase SDR.
   
   0.571
Gobs_1207
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gbm:Gbem_1827 alpha amylase catalytic region; Belongs to the glycosyl hydrolase 13 family.
 
  
0.424
Gobs_3213
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: sen:SACE_5742 putative glutamate synthase(NADPH) large subunit.
     
 0.412
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.