Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_4908PFAM: amino acid permease-associated region; KEGG: sgr:SGR_3504 putative amino acid transporter. (484 aa)    
Predicted Functional Partners:
Gobs_4909
PFAM: NLP/P60 protein; KEGG: nfa:nfa17200 hypothetical protein.
       0.510
Gobs_1722
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: sen:SACE_6021 regulatory protein.
  
     0.475
Gobs_2089
PFAM: glycosyl transferase family 2; KEGG: bcv:Bcav_0985 glycosyl transferase family 2.
  
 
   0.451
Gobs_1922
PFAM: amino acid permease-associated region; KEGG: rha:RHA1_ro02835 phenylethylamine permease.
  
     0.446
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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