Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_4919PFAM: SNARE associated Golgi protein; KEGG: krh:KRH_22460 hypothetical protein. (224 aa)    
Predicted Functional Partners:
Gobs_4921
KEGG: sen:SACE_6432 hypothetical protein.
       0.787
Gobs_4920
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: afw:Anae109_1202 haloacid dehalogenase, type II.
       0.777
Gobs_4918
PFAM: amidohydrolase; adenosine/AMP deaminase; Amidohydrolase 3; KEGG: sen:SACE_7247 N-ethylammeline chlorohydrolase.
       0.572
Gobs_2822
PFAM: major facilitator superfamily MFS_1; KEGG: sen:SACE_0785 major facilitator superfamily multidrug transporter.
 
     0.439
Gobs_4607
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sgr:SGR_5254 major facilitator superfamily permease.
 
     0.417
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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