Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gobs_4953PFAM: VWA containing CoxE family protein; KEGG: rha:RHA1_ro04978 hypothetical protein. (379 aa)    
Predicted Functional Partners:
Gobs_4954
PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sen:SACE_0533 ATPase.
 
     0.896
Gobs_4952
PFAM: protein of unknown function DUF182; KEGG: sen:SACE_0535 xanthine dehydrogenase accessory factor.
 
     0.824
Gobs_4922
PFAM: carbon monoxide dehydrogenase subunit G; KEGG: sen:SACE_0539 carbon monoxide dehydrogenase subunit G.
 
     0.799
Gobs_4924
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: rop:ROP_50430 putative carbon monoxide dehydrogenase large subunit.
 
   
 0.799
Gobs_1604
PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: fal:FRAAL1932 hypothetical protein.
 
     0.789
Gobs_4923
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: sen:SACE_0538 carbon monoxide dehydrogenase medium subunit.
 
     0.785
Gobs_0168
PFAM: carbon monoxide dehydrogenase subunit G; Polyketide cyclase/dehydrase; KEGG: rop:ROP_32810 hypothetical protein.
 
     0.783
Gobs_4663
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: sen:SACE_1160 carbon monoxide dehydrogenase, medium chain.
 
     0.768
Gobs_4665
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sen:SACE_1162 carbon monoxide dehydrogenase large subunit.
 
   
 0.745
Gobs_0171
Carbon-monoxide dehydrogenase (acceptor); PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: nca:Noca_1489 carbon-monoxide dehydrogenase (acceptor).
 
     0.728
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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