STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gobs_5083Hypothetical protein; KEGG: stp:Strop_4576 serine/threonine protein kinase. (544 aa)    
Predicted Functional Partners:
Gobs_3315
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: sco:SCO2110 serine/threonine protein kinase.
 
 
 0.749
Gobs_0039
KEGG: sen:SACE_0048 protein serine/threonine phosphatases; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein.
 
 
 0.727
Gobs_4098
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: fre:Franean1_0737 FHA domain-containing protein.
 
 
 
 0.694
Gobs_0041
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: stp:Strop_0042 FHA domain-containing protein.
 
 
 
 0.692
Gobs_4240
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mva:Mvan_4693 protein kinase.
  
     0.686
Gobs_5082
TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: sen:SACE_7380 hypothetical protein.
 
  
 0.676
Gobs_3363
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; RIO-like kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: ach:Achl_1600 serine/threonine protein kinase.
  
     0.673
Gobs_0062
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: nfa:nfa810 putative serine/threonine protein kinase.
  
     0.670
Gobs_5081
Glycoprotein; KEGG: rha:RHA1_ro03643 glycoprotein.
 
     0.656
Gobs_0386
SMART: protein phosphatase 2C domain protein; KEGG: ach:Achl_1336 protein serine/threonine phosphatase.
 
 
 0.652
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
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