STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
Gbro_0282TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: Os02g0805600; hypothetical protein; K00344 NADPH2:quinone reductase. (317 aa)    
Predicted Functional Partners:
Gbro_0636
PFAM: Beta-ketoacyl synthase; KEGG: pst:PSPTO_4686 coronafacic acid polyketide synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.741
Gbro_0635
PFAM: Acyl transferase; KEGG: mxa:MXAN_4529 polyketide synthase type I.
 
 
 0.549
Gbro_2179
PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: she:Shewmr4_1518 alcohol dehydrogenase.
 
 
 0.509
Gbro_0758
PFAM: MaoC domain protein dehydratase; KEGG: reh:H16_B0667 acyl dehydratase.
 
 0.461
Gbro_0629
PFAM: Acyl transferase; KR domain protein; Methyltransferase type 11; Methyltransferase type 12; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: mxa:MXAN_4527 polyketide synthase.
  
 
 0.449
Gbro_0215
PFAM: Beta-ketoacyl synthase; Acyl transferase; Thioesterase; phosphopantetheine-binding; KEGG: eca:ECA0603 type I polyketide synthase.
  
 
 0.421
Gbro_0265
PFAM: aldo/keto reductase; KEGG: bpt:Bpet2625 oxidoreductase.
  
 
 0.408
Gbro_3547
PFAM: aldo/keto reductase; KEGG: oan:Oant_3013 2,5-didehydrogluconate reductase.
  
 
 0.408
Your Current Organism:
Gordonia bronchialis
NCBI taxonomy Id: 526226
Other names: G. bronchialis DSM 43247, Gordonia bronchialis ATCC 25592, Gordonia bronchialis CCUG 20989, Gordonia bronchialis CCUG 34956, Gordonia bronchialis CIP 100847, Gordonia bronchialis DSM 43247, Gordonia bronchialis IFO 6047, Gordonia bronchialis JCM 3198, Gordonia bronchialis JCM 3231, Gordonia bronchialis LMG 5355, Gordonia bronchialis NBRC 16047, Gordonia bronchialis NCTC 10667, Gordonia bronchialis VKM Ac-956, Gordonia bronchialis str. DSM 43247, Gordonia bronchialis str. Tsukamura 3410, Gordonia bronchialis strain DSM 43247
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