Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Gbro_0496 | Gbro_0497 | PFAM: Anion-transporting ATPase; KEGG: dal:Dalk_2942 anion-transporting ATPase. | PFAM: Anion-transporting ATPase; KEGG: scl:sce8296 anion-transporting ATPase. | 0.987 |
Gbro_0496 | Gbro_0498 | PFAM: Anion-transporting ATPase; KEGG: dal:Dalk_2942 anion-transporting ATPase. | Hypothetical protein. | 0.793 |
Gbro_0496 | Gbro_0499 | PFAM: Anion-transporting ATPase; KEGG: dal:Dalk_2942 anion-transporting ATPase. | PFAM: Endoribonuclease L-PSP; KEGG: pol:Bpro_3162 endoribonuclease L-PSP. | 0.793 |
Gbro_0496 | Gbro_0728 | PFAM: Anion-transporting ATPase; KEGG: dal:Dalk_2942 anion-transporting ATPase. | PFAM: cyclase/dehydrase; Polyketide cyclase/dehydrase. | 0.576 |
Gbro_0496 | Gbro_0773 | PFAM: Anion-transporting ATPase; KEGG: dal:Dalk_2942 anion-transporting ATPase. | PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mlo:mll2952 transcriptional regulator. | 0.518 |
Gbro_0496 | Gbro_0990 | PFAM: Anion-transporting ATPase; KEGG: dal:Dalk_2942 anion-transporting ATPase. | PFAM: Protein of unknown function DUF2596. | 0.702 |
Gbro_0496 | Gbro_1006 | PFAM: Anion-transporting ATPase; KEGG: dal:Dalk_2942 anion-transporting ATPase. | PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: dal:Dalk_1448 NAD-dependent epimerase/dehydratase. | 0.616 |
Gbro_0496 | Gbro_1007 | PFAM: Anion-transporting ATPase; KEGG: dal:Dalk_2942 anion-transporting ATPase. | PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: dal:Dalk_1813 phospholipid/glycerol acyltransferase. | 0.699 |
Gbro_0496 | Gbro_3044 | PFAM: Anion-transporting ATPase; KEGG: dal:Dalk_2942 anion-transporting ATPase. | PFAM: cyclase/dehydrase; Polyketide cyclase/dehydrase; KEGG: mxa:MXAN_4454 putative cyclase/dehydrase. | 0.639 |
Gbro_0496 | Gbro_3524 | PFAM: Anion-transporting ATPase; KEGG: dal:Dalk_2942 anion-transporting ATPase. | TIGRFAM: anti-sigma factor. | 0.613 |
Gbro_0497 | Gbro_0496 | PFAM: Anion-transporting ATPase; KEGG: scl:sce8296 anion-transporting ATPase. | PFAM: Anion-transporting ATPase; KEGG: dal:Dalk_2942 anion-transporting ATPase. | 0.987 |
Gbro_0497 | Gbro_0498 | PFAM: Anion-transporting ATPase; KEGG: scl:sce8296 anion-transporting ATPase. | Hypothetical protein. | 0.793 |
Gbro_0497 | Gbro_0499 | PFAM: Anion-transporting ATPase; KEGG: scl:sce8296 anion-transporting ATPase. | PFAM: Endoribonuclease L-PSP; KEGG: pol:Bpro_3162 endoribonuclease L-PSP. | 0.793 |
Gbro_0497 | Gbro_0728 | PFAM: Anion-transporting ATPase; KEGG: scl:sce8296 anion-transporting ATPase. | PFAM: cyclase/dehydrase; Polyketide cyclase/dehydrase. | 0.682 |
Gbro_0497 | Gbro_0773 | PFAM: Anion-transporting ATPase; KEGG: scl:sce8296 anion-transporting ATPase. | PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mlo:mll2952 transcriptional regulator. | 0.664 |
Gbro_0497 | Gbro_0990 | PFAM: Anion-transporting ATPase; KEGG: scl:sce8296 anion-transporting ATPase. | PFAM: Protein of unknown function DUF2596. | 0.761 |
Gbro_0497 | Gbro_1006 | PFAM: Anion-transporting ATPase; KEGG: scl:sce8296 anion-transporting ATPase. | PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: dal:Dalk_1448 NAD-dependent epimerase/dehydratase. | 0.695 |
Gbro_0497 | Gbro_1007 | PFAM: Anion-transporting ATPase; KEGG: scl:sce8296 anion-transporting ATPase. | PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: dal:Dalk_1813 phospholipid/glycerol acyltransferase. | 0.677 |
Gbro_0497 | Gbro_3044 | PFAM: Anion-transporting ATPase; KEGG: scl:sce8296 anion-transporting ATPase. | PFAM: cyclase/dehydrase; Polyketide cyclase/dehydrase; KEGG: mxa:MXAN_4454 putative cyclase/dehydrase. | 0.721 |
Gbro_0497 | Gbro_3524 | PFAM: Anion-transporting ATPase; KEGG: scl:sce8296 anion-transporting ATPase. | TIGRFAM: anti-sigma factor. | 0.628 |
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