STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gbro_0750Hypothetical protein. (269 aa)    
Predicted Functional Partners:
Gbro_0751
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_6827 sodium ABC transporter ATP- binding protein NatA.
       0.873
Gbro_0752
Hypothetical protein.
       0.843
Gbro_0753
Hypothetical protein; KEGG: bmn:BMA10247_A0256 CheR methyltransferase SAM binding/TPR domain-containing protein.
       0.750
Gbro_0754
PFAM: Cupin 2 conserved barrel domain protein; KEGG: pna:Pnap_0932 cupin 2 domain-containing protein.
       0.676
Gbro_0755
PFAM: Methyltransferase type 11; KEGG: swp:swp_3805 SAM-dependent methyltransferase.
       0.577
Gbro_0749
PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: vap:Vapar_3549 transcriptional regulator, LuxR family.
       0.513
Gbro_0756
PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: dal:Dalk_2504 methyltransferase type 11.
       0.417
Gbro_0757
TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: dol:Dole_1053 carboxymuconolactone decarboxylase.
       0.414
Your Current Organism:
Gordonia bronchialis
NCBI taxonomy Id: 526226
Other names: G. bronchialis DSM 43247, Gordonia bronchialis ATCC 25592, Gordonia bronchialis CCUG 20989, Gordonia bronchialis CCUG 34956, Gordonia bronchialis CIP 100847, Gordonia bronchialis DSM 43247, Gordonia bronchialis IFO 6047, Gordonia bronchialis JCM 3198, Gordonia bronchialis JCM 3231, Gordonia bronchialis LMG 5355, Gordonia bronchialis NBRC 16047, Gordonia bronchialis NCTC 10667, Gordonia bronchialis VKM Ac-956, Gordonia bronchialis str. DSM 43247, Gordonia bronchialis str. Tsukamura 3410, Gordonia bronchialis strain DSM 43247
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