STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Gbro_1007PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: dal:Dalk_1813 phospholipid/glycerol acyltransferase. (393 aa)    
Predicted Functional Partners:
Gbro_1006
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: dal:Dalk_1448 NAD-dependent epimerase/dehydratase.
 
  
 0.931
Gbro_0496
PFAM: Anion-transporting ATPase; KEGG: dal:Dalk_2942 anion-transporting ATPase.
  
  
 0.702
Gbro_3044
PFAM: cyclase/dehydrase; Polyketide cyclase/dehydrase; KEGG: mxa:MXAN_4454 putative cyclase/dehydrase.
  
     0.702
Gbro_0497
PFAM: Anion-transporting ATPase; KEGG: scl:sce8296 anion-transporting ATPase.
  
  
 0.680
Gbro_0773
PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mlo:mll2952 transcriptional regulator.
  
     0.655
Gbro_0728
PFAM: cyclase/dehydrase; Polyketide cyclase/dehydrase.
  
     0.654
Gbro_3624
PFAM: protein of unknown function UPF0089; KEGG: bja:blr2880 hypothetical protein.
  
   0.636
Gbro_3492
PFAM: ABC-1 domain protein; KEGG: hch:HCH_01665 protein kinase.
  
     0.577
Gbro_1008
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: abb:ABBFA_002898 sorbitol dehydrogenase.
  
    0.558
Gbro_1994
PFAM: MaoC domain protein dehydratase; Beta- ketoacyl synthase; Acyl transferase; domain of unknown function DUF1729; KEGG: hypothetical protein; K00667 fatty acid synthase subunit alpha, fungi type.
  
  
 0.516
Your Current Organism:
Gordonia bronchialis
NCBI taxonomy Id: 526226
Other names: G. bronchialis DSM 43247, Gordonia bronchialis ATCC 25592, Gordonia bronchialis CCUG 20989, Gordonia bronchialis CCUG 34956, Gordonia bronchialis CIP 100847, Gordonia bronchialis DSM 43247, Gordonia bronchialis IFO 6047, Gordonia bronchialis JCM 3198, Gordonia bronchialis JCM 3231, Gordonia bronchialis LMG 5355, Gordonia bronchialis NBRC 16047, Gordonia bronchialis NCTC 10667, Gordonia bronchialis VKM Ac-956, Gordonia bronchialis str. DSM 43247, Gordonia bronchialis str. Tsukamura 3410, Gordonia bronchialis strain DSM 43247
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.