Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gbro_0161 | Gbro_1990 | Gbro_0161 | Gbro_1990 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | SMART: Rhodanese domain protein; KEGG: bra:BRADO5745 hypothetical protein. | 0.431 |
Gbro_1988 | Gbro_1990 | Gbro_1988 | Gbro_1990 | PFAM: AMP-dependent synthetase and ligase; KEGG: mxa:MXAN_2959 putative long-chain-fatty-acid-- CoA ligase. | SMART: Rhodanese domain protein; KEGG: bra:BRADO5745 hypothetical protein. | 0.454 |
Gbro_1988 | deaD | Gbro_1988 | Gbro_1989 | PFAM: AMP-dependent synthetase and ligase; KEGG: mxa:MXAN_2959 putative long-chain-fatty-acid-- CoA ligase. | DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.779 |
Gbro_1990 | Gbro_0161 | Gbro_1990 | Gbro_0161 | SMART: Rhodanese domain protein; KEGG: bra:BRADO5745 hypothetical protein. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.431 |
Gbro_1990 | Gbro_1988 | Gbro_1990 | Gbro_1988 | SMART: Rhodanese domain protein; KEGG: bra:BRADO5745 hypothetical protein. | PFAM: AMP-dependent synthetase and ligase; KEGG: mxa:MXAN_2959 putative long-chain-fatty-acid-- CoA ligase. | 0.454 |
Gbro_1990 | Gbro_1991 | Gbro_1990 | Gbro_1991 | SMART: Rhodanese domain protein; KEGG: bra:BRADO5745 hypothetical protein. | KEGG: gme:Gmet_3050 superfamily I DNA/RNA helicase. | 0.621 |
Gbro_1990 | deaD | Gbro_1990 | Gbro_1989 | SMART: Rhodanese domain protein; KEGG: bra:BRADO5745 hypothetical protein. | DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.743 |
Gbro_1991 | Gbro_1990 | Gbro_1991 | Gbro_1990 | KEGG: gme:Gmet_3050 superfamily I DNA/RNA helicase. | SMART: Rhodanese domain protein; KEGG: bra:BRADO5745 hypothetical protein. | 0.621 |
Gbro_1991 | deaD | Gbro_1991 | Gbro_1989 | KEGG: gme:Gmet_3050 superfamily I DNA/RNA helicase. | DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.436 |
deaD | Gbro_1988 | Gbro_1989 | Gbro_1988 | DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | PFAM: AMP-dependent synthetase and ligase; KEGG: mxa:MXAN_2959 putative long-chain-fatty-acid-- CoA ligase. | 0.779 |
deaD | Gbro_1990 | Gbro_1989 | Gbro_1990 | DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | SMART: Rhodanese domain protein; KEGG: bra:BRADO5745 hypothetical protein. | 0.743 |
deaD | Gbro_1991 | Gbro_1989 | Gbro_1991 | DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | KEGG: gme:Gmet_3050 superfamily I DNA/RNA helicase. | 0.436 |