node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gbro_2204 | Gbro_2207 | Gbro_2204 | Gbro_2207 | TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4389 polar amino acid ABC transporter, inner membrane subunit. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_00678 ATP-binding protein of glutamate/aspartate transport system. | 0.999 |
Gbro_2204 | Gbro_2209 | Gbro_2204 | Gbro_2209 | TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4389 polar amino acid ABC transporter, inner membrane subunit. | Hypothetical protein. | 0.698 |
Gbro_2204 | miaB | Gbro_2204 | Gbro_2208 | TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4389 polar amino acid ABC transporter, inner membrane subunit. | RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.684 |
Gbro_2207 | Gbro_2204 | Gbro_2207 | Gbro_2204 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_00678 ATP-binding protein of glutamate/aspartate transport system. | TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4389 polar amino acid ABC transporter, inner membrane subunit. | 0.999 |
Gbro_2207 | Gbro_2209 | Gbro_2207 | Gbro_2209 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_00678 ATP-binding protein of glutamate/aspartate transport system. | Hypothetical protein. | 0.703 |
Gbro_2207 | miaB | Gbro_2207 | Gbro_2208 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_00678 ATP-binding protein of glutamate/aspartate transport system. | RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.703 |
Gbro_2209 | Gbro_2204 | Gbro_2209 | Gbro_2204 | Hypothetical protein. | TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4389 polar amino acid ABC transporter, inner membrane subunit. | 0.698 |
Gbro_2209 | Gbro_2207 | Gbro_2209 | Gbro_2207 | Hypothetical protein. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_00678 ATP-binding protein of glutamate/aspartate transport system. | 0.703 |
Gbro_2209 | miaB | Gbro_2209 | Gbro_2208 | Hypothetical protein. | RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.784 |
Gbro_2351 | miaB | Gbro_2351 | Gbro_2208 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: gme:Gmet_0066 Fmu, rRNA SAM-dependent methyltransferase:Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.727 |
Gbro_2351 | pnp | Gbro_2351 | Gbro_2164 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: gme:Gmet_0066 Fmu, rRNA SAM-dependent methyltransferase:Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.585 |
Gbro_2351 | rlmN | Gbro_2351 | Gbro_2114 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: gme:Gmet_0066 Fmu, rRNA SAM-dependent methyltransferase:Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.949 |
Gbro_3165 | miaB | Gbro_3165 | Gbro_2208 | Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.708 |
Gbro_3165 | pnp | Gbro_3165 | Gbro_2164 | Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.464 |
Gbro_3165 | rlmN | Gbro_3165 | Gbro_2114 | Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.612 |
Gbro_3313 | Gbro_3314 | Gbro_3313 | Gbro_3314 | PFAM: conserved hypothetical protein; KEGG: pna:Pnap_1711 hypothetical protein; Belongs to the LOG family. | PFAM: conserved hypothetical protein; KEGG: sfu:Sfum_1863 conserved hypothetical protein 730; Belongs to the LOG family. | 0.964 |
Gbro_3313 | miaA | Gbro_3313 | Gbro_2213 | PFAM: conserved hypothetical protein; KEGG: pna:Pnap_1711 hypothetical protein; Belongs to the LOG family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.814 |
Gbro_3313 | miaB | Gbro_3313 | Gbro_2208 | PFAM: conserved hypothetical protein; KEGG: pna:Pnap_1711 hypothetical protein; Belongs to the LOG family. | RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.794 |
Gbro_3314 | Gbro_3313 | Gbro_3314 | Gbro_3313 | PFAM: conserved hypothetical protein; KEGG: sfu:Sfum_1863 conserved hypothetical protein 730; Belongs to the LOG family. | PFAM: conserved hypothetical protein; KEGG: pna:Pnap_1711 hypothetical protein; Belongs to the LOG family. | 0.964 |
Gbro_3314 | miaA | Gbro_3314 | Gbro_2213 | PFAM: conserved hypothetical protein; KEGG: sfu:Sfum_1863 conserved hypothetical protein 730; Belongs to the LOG family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.781 |