STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gbro_2737PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mxa:MXAN_5841 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (275 aa)    
Predicted Functional Partners:
Gbro_1022
PFAM: acyl-CoA oxidase domain protein; acyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_6432 putative acyl-CoA dehydrogenase.
 
 0.959
Gbro_1359
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: dat:HRM2_10010 Acd3.
  
 0.952
Gbro_3133
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: vei:Veis_0234 acyl-CoA dehydrogenase domain- containing protein.
  
 0.952
Gbro_4184
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: abb:ABBFA_002133 acyl-CoA dehydrogenase.
  
 0.952
Gbro_4408
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: xcv:XCV1529 glutaryl-CoA dehydrogenase.
  
 0.952
Gbro_4503
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_6987 fatty oxidation complex, alpha subunit.
0.934
Gbro_3203
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: aci:ACIAD1568 putative enoyl-CoA hydratase/isomerase.
 
  
0.932
Gbro_1357
Methylcrotonoyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: bte:BTH_II0948 carboxyl transferase domain- containing protein.
  
 0.927
Gbro_4639
TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pla:Plav_0752 quinone oxidoreductase putative YhdH/YhfP.
  
 0.912
Gbro_4129
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: pfl:PFL_2166 3-hydroxybutyryl-CoA dehydrogenase.
 0.884
Your Current Organism:
Gordonia bronchialis
NCBI taxonomy Id: 526226
Other names: G. bronchialis DSM 43247, Gordonia bronchialis ATCC 25592, Gordonia bronchialis CCUG 20989, Gordonia bronchialis CCUG 34956, Gordonia bronchialis CIP 100847, Gordonia bronchialis DSM 43247, Gordonia bronchialis IFO 6047, Gordonia bronchialis JCM 3198, Gordonia bronchialis JCM 3231, Gordonia bronchialis LMG 5355, Gordonia bronchialis NBRC 16047, Gordonia bronchialis NCTC 10667, Gordonia bronchialis VKM Ac-956, Gordonia bronchialis str. DSM 43247, Gordonia bronchialis str. Tsukamura 3410, Gordonia bronchialis strain DSM 43247
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