STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gbro_2764PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: shl:Shal_2699 hypothetical protein. (461 aa)    
Predicted Functional Partners:
Gbro_2765
PFAM: protein of unknown function DUF21; CBS domain containing protein; KEGG: cjd:JJD26997_0191 putative transporter.
 
  
0.930
Gbro_2763
IMP dehydrogenase family protein; KEGG: afw:Anae109_3133 inosine 5-monophosphate dehydrogenase; TIGRFAM: IMP dehydrogenase family protein; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein.
  
  
 0.807
Gbro_2766
Hypothetical protein.
       0.800
Gbro_2762
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
       0.747
Gbro_0413
PFAM: protein of unknown function DUF21; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: shl:Shal_2700 hypothetical protein.
 
   
0.664
Gbro_2761
PFAM: peptidase M48 Ste24p; KEGG: afw:Anae109_1807 peptidase M56 BlaR1.
  
    0.555
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
       0.547
Gbro_2760
PFAM: Penicillinase repressor; KEGG: spc:Sputcn32_3999 transcriptional regulator, TrmB.
       0.476
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.467
Gbro_3159
PFAM: PhoH family protein; KEGG: mxa:MXAN_4738 PhoH family protein.
  
  
 0.445
Your Current Organism:
Gordonia bronchialis
NCBI taxonomy Id: 526226
Other names: G. bronchialis DSM 43247, Gordonia bronchialis ATCC 25592, Gordonia bronchialis CCUG 20989, Gordonia bronchialis CCUG 34956, Gordonia bronchialis CIP 100847, Gordonia bronchialis DSM 43247, Gordonia bronchialis IFO 6047, Gordonia bronchialis JCM 3198, Gordonia bronchialis JCM 3231, Gordonia bronchialis LMG 5355, Gordonia bronchialis NBRC 16047, Gordonia bronchialis NCTC 10667, Gordonia bronchialis VKM Ac-956, Gordonia bronchialis str. DSM 43247, Gordonia bronchialis str. Tsukamura 3410, Gordonia bronchialis strain DSM 43247
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.