STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Gbro_3203PFAM: Enoyl-CoA hydratase/isomerase; KEGG: aci:ACIAD1568 putative enoyl-CoA hydratase/isomerase. (286 aa)    
Predicted Functional Partners:
Gbro_3271
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dal:Dalk_2640 enoyl-CoA hydratase/isomerase.
 
  
0.932
Gbro_4172
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rlt:Rleg2_4369 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
0.932
Gbro_0908
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bch:Bcen2424_0176 enoyl-CoA hydratase.
  
  
 
0.929
Gbro_3826
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpi:Rpic_0118 enoyl-CoA hydratase.
 
   
 0.779
Gbro_1994
PFAM: MaoC domain protein dehydratase; Beta- ketoacyl synthase; Acyl transferase; domain of unknown function DUF1729; KEGG: hypothetical protein; K00667 fatty acid synthase subunit alpha, fungi type.
  
 0.777
Gbro_1279
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: acp:A2cp1_3883 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
     0.773
Gbro_0929
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cti:RALTA_B0499 enoyl-CoA hydratase.
 
   
 0.756
Gbro_3981
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pha:PSHAa0905 enoyl-CoA hydratase.
 
   
 0.752
rpmB-2
TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: nam:NAMH_1582 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
   
   0.703
Gbro_4129
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: pfl:PFL_2166 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.676
Your Current Organism:
Gordonia bronchialis
NCBI taxonomy Id: 526226
Other names: G. bronchialis DSM 43247, Gordonia bronchialis ATCC 25592, Gordonia bronchialis CCUG 20989, Gordonia bronchialis CCUG 34956, Gordonia bronchialis CIP 100847, Gordonia bronchialis DSM 43247, Gordonia bronchialis IFO 6047, Gordonia bronchialis JCM 3198, Gordonia bronchialis JCM 3231, Gordonia bronchialis LMG 5355, Gordonia bronchialis NBRC 16047, Gordonia bronchialis NCTC 10667, Gordonia bronchialis VKM Ac-956, Gordonia bronchialis str. DSM 43247, Gordonia bronchialis str. Tsukamura 3410, Gordonia bronchialis strain DSM 43247
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